PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0843s0002.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 330aa    MW: 36257.5 Da    PI: 6.4417
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0843s0002.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.41.6e-29151209259
                          --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                           D ++WrKYGqK++kgs +prsYYrC+s+ gC ++k+ve+s+ dp++++itY+ +Hnh+
  Kalax.0843s0002.1.p 151 TDLWAWRKYGQKPIKGSFYPRSYYRCSSSkGCAARKQVEQSSLDPNIFTITYTADHNHP 209
                          699************************998****************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.2E-30136211IPR003657WRKY domain
SuperFamilySSF1182909.15E-25145211IPR003657WRKY domain
PROSITE profilePS5081130.285145211IPR003657WRKY domain
SMARTSM007743.6E-34150210IPR003657WRKY domain
PfamPF031062.2E-24152209IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    Send to blast
MIMDDNWGLH AVVNGCTQQA QQWNNAVDIQ EELLFHMGQN HHQLPDLPFD LISSPMSFDL  60
HELEDIYKLP FGDGLASGVM LASGSNPKLA VDMQQHHQQY EVFDGSSSSA YHLPGDNGTA  120
FVAAAAASNR AKRKNQQKRV VQHVTANGLS TDLWAWRKYG QKPIKGSFYP RSYYRCSSSK  180
GCAARKQVEQ SSLDPNIFTI TYTADHNHPH PTRRSSLSGV SKNKKALSAP PNKKPTPQPP  240
PPPTSSLPLK DSSSSNSPTM LNMSAPTTPL MVENTSREDG IKEECSTVAV EDGSMMDLGC  300
LGFEEEIGEM GFDGYQSWFP HWLDGRSTC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A5e-16139211274WRKY transcription factor 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.18e-43WRKY DNA-binding protein 27